国际学术杂志论文：
1) Chen Baodong, Christie Peter and Li Xiaolin, 2001. A modified glass bead compartment cultivition system for the study of nutrient uptake by arbuscular mycorrhizae. Chemosphere, 42: 185-192.
2) Chen Baodong, Tao Hongqun, Li Xiaolin, Christie Peter and Wong Minghong, 2003. The role of arbuscular mycorrhiza in zinc uptake by red clover growing in a calcareous soil spiked with various quantities of zinc. Chemosphere, 50: 839-846.
3) Chen Baodong, Shen Hong, Li Xiaolin, Feng Gu and Christie Peter, 2004. Effects of EDTA application and arbuscular mycorrhizal colonization on zinc uptake by maize (Zea mays L.) from soil experimentally contaminated with zinc. Plant and Soil 261: 219-229.
4) Chen Baodong, Liu Yu, Shen Hong, Li Xiaolin and Christie Peter, 2004. Uptake of cadmium from a experimentally contaminated calcareous soil by arbuscular mycorrhizal maize (Zea mays L.). Mycorrhiza 14: 347-354.
5) Liu Yu, Zhu Yong-Guan, Chen Baodong, Christie Peter and Li Xiaolin, 2005. Influence of the arbuscular mycorrhizal fungus Glomus mosseae on uptake of arsenate by the As hyperaccumulator fern Pteris vittata L. Mycorrhiza 15(3): 187-192.
6) Chen Baodong, Roos Per, Borggaard Ole K., Zhu Yong-Guan and Jakobsen Iver, 2005. Mycorrhiza and root hairs in barley enhance acquisition of phosphorus and uranium from phosphate rock but mycorrhiza decreases root to shoot uranium transfer. New Phytologist 165: 591-598.
7) Jakobsen Iver, Chen Baodong, Munkvold Lisa, Lundsgaard Thorben and Zhu Yong-Guan, 2005. Contrasting phosphate acquisition of mycorrhizal fungi with that of root hairs using the root hairless barley mutant. Plant, Cell and Envrionment 28, 928-938.
8) Chen Baodong, Tang Xiangyu, Zhu Yongguan and Christie Peter, 2005. Metal concentration and mycorrhizal status of plants colonizing copper mine tailings: potential for phytoremediation. Science in China (Ser. C) 48 Supp. I, 156-164.
9) Chen Baodong, Zhu Yong-Guan, Zhang Xuhong and Jakobsen Iver, 2005. Uranium and phosphorus uptake from a field-contaminated soil by bald root mutant and wild type barley plants (Hordeum vulgare L.) in association with arbuscular mycorrhizal fungus Glomus caledonium. Environmental Science and Pollution Research International 12(6), 325-331.
10) Chen Baodong, Jakobsen Iver, Roos Per and Zhu Yong-Guan. 2005. Effects of the mycorrhizal fungus Glomus intraradices on uranium uptake and accumulation by Medicago truncatula L. from uranium-contaminated soil. Plant and Soil 275 (1-2): 349-359.
11) Chen Baodong, Zhu Yong-Guan and Smith F. Andrew. 2006. Effects of arbuscular mycorrhizal inoculation on uranium and arsenic accumulation by Chinese brake fern (Pteris vittata L.) from a uranium mining-impacted soil. Chemosphere 62: 1464-1473.
12) Zhang Xuhong, Lin Aijun, Chen Baodong, Smith Sally E, Smith F Andrew, 2006. Effects of Glomus mosseae on the toxicity of heavy metals to Vicia faba. Journal of Environmental Sciences 4: 721-726
13) Zhang Xuhong, Zhu Yong-Guan, Lin Ai-Jun, Chen Baodong, Smith Sally E. and Smith F. Andrew, 2006. Arbuscular mycorrhizal fungi can alleviate the adverse effects of chlorothalonil on Oryza sativa L. Chemosphere 64 (10): 1627-1632.
14) Huang Honglin, Zhang Suzhen, Chen Baodong, Wu Naiying, Shan Xiaoquan and Christie Peter, 2006. Uptake of atrazine and cadmium from soil by maize (Zea mays L.) in association with the arbuscular mycorrhizal fungus Glomus etunicatum. Journal of Agricultura; and Food Chemistry 54 (25): 9377-9382.
15) Chen Baodong, Zhu Yong-Guan, Duan Jing, Xiao Xueyi, Smith Sally E, 2007. Effects of the arbuscular mycorrhizal fungus Glomus mosseae on growth and metal uptake by four plant species in copper mine tailings. Environmental Pollution 147 (2): 374-380.
16) Chen Baodong, Xiao Xueyi, Zhu Yong-Guan, Smith F Andrew, Smith Sally E and Xie Zhengmiao, 2007. The arbuscular mycorrhizal fungus Glomus mosseae gives contrary effects on phosphorus and arsenic acquisition by Medicago sativa Linn. Science of the Total Environment 379 (2-3): 226-234.
17) Chen Meimei, Zhu Yong-Guan, Su Yuhong, Chen Baodong, Fu Bojie and Marschner Petra, 2007. Effects of soil moisture and plant interactions on the soil microbial community structure. European Journal of Soil Biology 43 (1): 31-38.
18) Xia Yunsheng, Chen Baodong, Christie Peter, Smith F. Andrew and Li Xiaolin, 2007. Arsenic uptake by arbuscular mycorrhizal maize (Zea mays L.) grown in an arsenic-contaminated soil with added phosphorus. Journal of Environmental Sciences -CHINA 19 (10): 1245-1251.
19) Chen Baodong, Zhu Yong-Guan, Roos Per and Jakoben Iver 2007 Arbuscular mycorrhizas contribute to phytostabilization of uranium in uranium mining tailings. Journal of Environmental Radioactivity 99(5): 801-810.
20) Boulois H. Dupré de, Joner EJ, Leyval C, Jakobsen I, Chen BD, Roos P, Thiry I, Rufyikiri G, Delvaux B and Declerck S, 2008. Impact of arbuscular mycorrhizal fungi on uranium accumulation by plants. Journal of Environmental Radioactivity 99(5): 775-784.
21) Dong Yan, Zhu Yong-Guan, Smith F. Andrew, Wang Youshan and Chen Baodong, 2008. Arbuscular mycorrhiza enhanced arsenic resistance of both white clover (Trifolium repens Linn.) and ryegrass (Lolium perenne L.) plants in an arsenic-contaminated soil. Environmental Pollution 155: 174-181
22) Chen Meimei, Chen Baodong and Marschner Petra, 2008. Plant growth and soil microbial community structure of legumes and grasses grown in monoculture or mixture. Journal of Environmental Sciences 20: 1231-1237.

国内学术刊物论文：
23) Chen Baodong, Li Xiaolin and Christie Peter, 2002. Studies on two arbuscular mycorrhizal fungi colonizing maize under different phosphorus regimes in a compartment cultivation system. Pedosphere, 12(2): 121-130.
24) 陈保冬, 李晓林, 朱永官, 2005. 丛枝菌根真菌菌丝体吸附重金属的潜力及特征. 菌物学报24(2): 283-291.
25) 朱永官，陈保冬，林爱军，叶志鸿，黄铭洪, 2005. 珠江三角洲地区土壤重金属污染控制与修复研究的若干思考. 环境科学学报 25(12): 1575-1579.
26) 肖雪毅，陈保冬，朱永官，2006. 丛枝菌根真菌对铜尾矿上植物生长和矿质营养的影响. 环境科学学报 26(2): 312-317.
27) 刘翠花, 陈保冬, 朱永官, 张澈, 2006. 丛枝菌根真菌对青生长发育及磷营养的影响研究. 土壤学报 43(6): 1052-1055.
28) 夏运生，陈保冬，朱永官，吴亚洵，李晓林, 2008. 外加不同铁源和丛枝菌根对砷污染土壤上玉米生长及磷、砷吸收的影响. 环境科学学报 28(3): 516-524.
29) 杨秀梅，陈保冬，朱永官，王冬梅，王幼珊, 2008. 丛枝菌根真菌（Glomus intraradices）对铜污染土壤上玉米生长的影响. 生态学报28(3): 1052-1058.
30) 陈梅梅，陈保冬，许毓，田慧颖，邓皓，2009. 菌根真菌对石油污染土壤修复作用的研究进展. 生态学杂志 28(6): 1171-1177.
31) 陈梅梅，陈保冬，王新军，朱永官，王幼珊，2009. 不同磷水平土壤接种丛枝菌根真菌对植物生长和养分吸收的影响. 生态学报 29(4): 1980-1986.

学术专著：
32)  参编 《土壤微生物生态学及其实验技术》 （姚槐应 黄昌勇 等 主编）科学出版社 北京 2006.8
33) Zhu Yong-Guan, Kong Weidong, Chen Baodong, Nan Zhibiao and Christie Peter. Soil microbial community: understanding the belowground network for sustainable grassland management. In: McGilloway David A (Ed.). Grassland: A Global Resource. Wageningen Academic Publishers, The Netherlands, 209-217, 2005.
34) Zhu Yong-Guan and Chen Baodong，2009. Principles and Technologies for Remediation of Uranium-Contaminated Environments. In: Radioactivity in the Environment, 14: 357-374. (Book chapter)